Package: tbeptools 3.0.0
![](https://github.com/tbep-tech/tbeptools/raw/HEAD/man/figures/logo.png)
tbeptools: Data and Indicators for the Tampa Bay Estuary Program
Several functions are provided for working with Tampa Bay Estuary Program data and indicators, including the water quality report card, tidal creek assessments, Tampa Bay Nekton Index, Tampa Bay Benthic Index, seagrass transect data, habitat report card, and fecal indicator bacteria. Additional functions are provided for miscellaneous tasks, such as reference library curation.
Authors:
tbeptools_3.0.0.tar.gz
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tbeptools.pdf |tbeptools.html✨
tbeptools/json (API)
# Install 'tbeptools' in R: |
install.packages('tbeptools', repos = c('https://tbep-tech.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tbep-tech/tbeptools/issues
- acres - Tampa Bay intertidal and supratidal land use and cover
- benthicdata - Benthic data for the Tampa Bay Benthic Index current as of 03132024
- bsmap - Terrain basemap
- catchpixels - Catchments and radar pixels (for precip) of selected Enterococcus stations
- catchprecip - Daily precip by catchment for selected Enterococcus stations
- enterodata - Enterococcus data from 53 key Enterococcus stations since 1995
- epcdata - All bay data as of 20240201
- fibdata - All Fecal Indicator Bacteria (FIB) data as of 20240814
- fimdata - FIM data for Tampa Bay Nekton Index current as of 07092024
- fimstations - Spatial data object of FIM stations including Tampa Bay segments
- hmptrgs - Habitat Master Plan targets and goals
- iwrraw - FDEP IWR run 65
- phytodata - Phytoplankton data current as of 03202024
- seagrass - Seagrass coverage by year
- sedimentdata - Sediment data for the Tampa Bay current as of 12142023
- sgmanagement - Seagrass management areas for Tampa Bay
- sgseg - Seagrass segment reporting boundaries for southwest Florida
- stations - Bay stations by segment
- subtacres - Tampa Bay subtidal cover
- swfwmdtbseg - Spatial data object of SWFWMD Tampa Bay segments
- targets - Bay segment targets
- tbniref - Reference conditions for Tampa Bay Nekton Index metrics
- tbnispp - Reference table for Tampa Bay Nekton Index species classifications
- tbseg - Spatial data object of Tampa Bay segments
- tbseglines - Spatial data object of lines defining major Tampa Bay segments
- tbsegshed - Spatial data object of Tampa Bay segments plus watersheds
- tbshed - Spatial data object of Tampa Bay watershed
- tidalcreeks - Spatial data object of tidal creeks in Impaired Waters Rule, Run 65
- tidaltargets - Tidal creek nitrogen targets
- transect - Seagrass transect data for Tampa Bay current as of 04122024
- trnlns - Seagrass transect locations
- trnpts - Seagrass transect starting locations
data-analysistampa-baytbepwater-quality
Last updated 12 days agofrom:af03208727. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Aug 27 2024 |
R-4.5-win | NOTE | Aug 27 2024 |
R-4.5-linux | NOTE | Aug 27 2024 |
R-4.4-win | NOTE | Aug 27 2024 |
R-4.4-mac | NOTE | Aug 27 2024 |
R-4.3-win | NOTE | Aug 27 2024 |
R-4.3-mac | NOTE | Aug 27 2024 |
Exports:anlz_attainanlz_attainsiteanlz_avedatanlz_avedatsiteanlz_enteromapanlz_fibmapanlz_fibmatrixanlz_fibwetdryanlz_hmpreportanlz_hydroloadanlz_iwrrawanlz_refsanlz_sedimentaddtotanlz_sedimentaveanlz_sedimentpelanlz_sedimentpelaveanlz_tbbimedanlz_tbbiscranlz_tbniaveanlz_tbnimetanlz_tbniscranlz_tdlcrkanlz_tdlcrkindicanlz_transectaveanlz_transectavesppanlz_transectoccanlz_yrattainread_dlcurrentread_formbenthicread_formfibread_formfimread_formphytoread_formsedimentread_formtransectread_formwqread_formwqpread_importbenthicread_importenteroread_importepcread_importfibread_importfimread_importphytoread_importsedimentread_importwqread_importwqpread_transectshow_annualassessshow_boxplotshow_compplotshow_enteromapshow_fibmapshow_fibmatrixshow_hmpreportshow_matrixshow_matrixplotlyshow_ratabshow_reactableshow_seagrasscoverageshow_sedimentalratioshow_sedimentaveshow_sedimentmapshow_sedimentpelaveshow_sedimentpelaveplotlyshow_sedimentpelmapshow_segmatrixshow_segplotlyshow_sitemapshow_sitesegmapshow_tbbimatrixshow_tbnimatrixshow_tbniscrshow_tbniscrallshow_tbniscrplotlyshow_tdlcrkshow_tdlcrkindicshow_tdlcrkindiccdfshow_tdlcrklineshow_tdlcrkmatrixshow_tdlcrkradarshow_thrplotshow_transectshow_transectavesppshow_transectmatrixshow_transectsumshow_wqmatrixutil_fibiconsutil_fiblevsutil_htmlutil_maputil_orgin
Dependencies:askpassbase64encbitbit64bslibcachemcellrangerclassclassIntclicliprcolorspacecommonmarkcpp11crayoncrosstalkcrulcurldata.tabledataRetrievalDBIdigestdplyre1071evaluatefansifarverfastmapflextablefontawesomefontBitstreamVerafontLiberationfontquiverfsgdtoolsgenericsgeonamesgfontsggplot2gluegridExtragtablehighrhmshoardrhtmltoolshtmlwidgetshttpcodehttpuvhttrisdparserisobandjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevalleafletleaflet.providerslifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeofficeropensslpatchworkpillarpkgconfigplotlypngprettyunitsprogresspromisesproxypurrrR6raggrappdirsrasterRColorBrewerRcppreactablereactRreadrreadxlrematchrjsonrlangrmarkdownrnoaas2sassscalessfshinysourcetoolsspstringistringrsyssystemfontsterratextshapingtibbletidyrtidyselecttimechangetinytextriebeardtzdbunitsurltoolsutf8uuidvctrsviridisLitevroomwithrwkxfunXMLxml2xtableyamlzip
Fecal Indicator Bacteria
Rendered fromfib.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2024-08-14
Started: 2023-07-03
Habitat Master Plan
Rendered fromhabitatmasterplan.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2024-06-10
Started: 2022-11-19
Seagrass Transect Data
Rendered fromseagrasstransect.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2024-04-12
Started: 2020-07-21
Tampa Bay Benthic Index
Rendered fromtbbi.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2023-12-14
Started: 2020-08-21
Tampa Bay Nekton Index
Rendered fromtbni.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2023-02-17
Started: 2020-04-24
Tidal Creek Assessment
Rendered fromtidalcreeks.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2024-03-20
Started: 2019-12-31
Water Quality Data
Rendered fromintro.Rmd
usingknitr::rmarkdown
on Aug 27 2024.Last update: 2024-03-20
Started: 2019-07-09